sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3IQR-A41-A13
X
>3R8O-A389-A371
X
>3R8T-A1326-A1315
X
>3F1G-A381-A363
X
>3F1E-A381-A363
X
>2J02-A381-A363
X
>2J00-A381-A363
X
>2UUA-A381-A363
X
>2VQE-A381-A363
X
>2UUB-A381-A363
X
>1N32-A381-A363
X
>1XMQ-A381-A363
X
>2UXC-A381-A363
X
>1FJG-A381-A363
X
</seq>
<hsp>
0 1:0.984416125526
0 2:1.0
0 3:0.797858076255
0 4:0.795858579031
0 5:0.829058232034
0 6:0.829506051613
0 7:0.918224478939
0 8:0.904863663341
0 9:0.906588340652
0 10:0.960388034811
0 11:0.922008545702
0 12:0.961150443588
0 13:0.992145995962
1 2:0.489763727929
1 3:0.312190084622
1 4:0.316807635808
1 5:0.355835556407
1 6:0.355870118819
1 7:0.229496310004
1 8:0.228017128885
1 9:0.208025173687
1 10:0.276694535757
1 11:0.281163717322
1 12:0.234980890705
1 13:0.215606774458
2 3:0.522555699104
2 4:0.526276925856
2 5:0.444774149602
2 6:0.445397253058
2 7:0.488049288687
2 8:0.484365267882
2 9:0.472937324329
2 10:0.448658767065
2 11:0.495303593547
2 12:0.491109949167
2 13:0.437980579929
3 4:0.0104008180674
3 5:0.348757851079
3 6:0.349963758221
3 7:0.254822483371
3 8:0.223932532782
3 9:0.159975968189
3 10:0.31311721497
3 11:0.229393089918
3 12:0.263717593269
3 13:0.31167226453
4 5:0.349592368068
4 6:0.35082356623
4 7:0.2557481003
4 8:0.224693716458
4 9:0.161977441881
4 10:0.314090799386
4 11:0.22882542121
4 12:0.264662188538
4 13:0.313603240369
5 6:0.00785035702403
5 7:0.227261817921
5 8:0.238180269766
5 9:0.294796403955
5 10:0.21014116745
5 11:0.25508552278
5 12:0.253829563622
5 13:0.256584323532
6 7:0.226774353264
6 8:0.237740490594
6 9:0.295044523074
6 10:0.21005475023
6 11:0.254510248261
6 12:0.253832166814
6 13:0.255597491276
7 8:0.0446352168886
7 9:0.131528328406
7 10:0.100720695147
7 11:0.0993087168757
7 12:0.0819703312715
7 13:0.113446517778
8 9:0.0983624227985
8 10:0.126578024703
8 11:0.0806041564253
8 12:0.0937366561198
8 13:0.121756734422
9 10:0.189989121326
9 11:0.115305320314
9 12:0.131041405538
9 13:0.161135353114
10 11:0.131845576821
10 12:0.0890836458271
10 13:0.106382478009
11 12:0.0928718997242
11 13:0.133891298912
12 13:0.102448957121
</hsp>