sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1FJG-A1497-A744
X
>3R8O-A784-A693
X
>3MUM-R87-R88
X
>3U5F-6970-61021
X
>1N32-A743-A794
X
>1XMQ-A743-A794
X
>2VQE-A743-A794
X
>2UUA-A743-A794
X
>2UXC-A743-A794
X
>2VQF-A743-A794
X
>1FJG-A743-A794
X
</seq>
<hsp>
0 1:0.9526948996
0 2:0.423855901195
0 3:0.958832374776
0 4:0.876931807343
0 5:0.872971658173
0 6:0.88016604364
0 7:0.921167786352
0 8:0.921214117456
0 9:0.879756746976
0 10:0.922501868985
1 2:0.844481074688
1 3:0.948915747362
1 4:0.916221670536
1 5:0.917234478315
1 6:0.958570127296
1 7:1.0
1 8:0.934499969168
1 9:0.930833072904
1 10:0.92880429374
2 3:0.674671014856
2 4:0.611100727794
2 5:0.621791755095
2 6:0.626332930018
2 7:0.650289864079
2 8:0.653637998547
2 9:0.630575115047
2 10:0.651662237179
3 4:0.13486946013
3 5:0.14421828923
3 6:0.16100919536
3 7:0.133417397789
3 8:0.0922503638912
3 9:0.146241551306
3 10:0.101956684894
4 5:0.0534742874859
4 6:0.0702631039794
4 7:0.0943747518026
4 8:0.0791762217047
4 9:0.062315422126
4 10:0.0686411782792
5 6:0.0533932187652
5 7:0.103320019854
5 8:0.0775591000805
5 9:0.0345273324627
5 10:0.0703204059454
6 7:0.0788520709103
6 8:0.102166164532
6 9:0.0531220900414
6 10:0.0926887505115
7 8:0.0920057713591
7 9:0.0993312613764
7 10:0.0931004717751
8 9:0.0746663978387
8 10:0.0352770833502
9 10:0.0687891124813
</hsp>