sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J01-A68-A103
X
>3CCJ-061-096
X
>3F1H-A68-A103
X
>3F1F-A68-A103
X
>3OH7-A68-A103
X
>3OH5-A68-A103
X
>1QVG-061-096
X
>1YJN-061-096
X
>1YIT-061-096
X
>1KD1-A61-A96
X
>2QEX-061-096
X
</seq>
<hsp>
0 1:0.692840229491
0 2:0.363821742427
0 3:0.373106863768
0 4:0.538699036865
0 5:0.536744113607
0 6:0.809592412836
0 7:0.792176756941
0 8:0.80044910947
0 9:0.843577533346
0 10:1.0
1 2:0.481245858584
1 3:0.48431271599
1 4:0.362703811019
1 5:0.432515180088
1 6:0.655237422974
1 7:0.554795325659
1 8:0.544066747057
1 9:0.649127219286
1 10:0.703323686314
2 3:0.0286950501191
2 4:0.321027555586
2 5:0.340319507259
2 6:0.837464520583
2 7:0.782815884866
2 8:0.772995995814
2 9:0.85076834018
2 10:0.955529203767
3 4:0.330067625055
3 5:0.349969531101
3 6:0.838160887876
3 7:0.781032050693
3 8:0.769912898371
3 9:0.84818484315
3 10:0.952307004636
4 5:0.0792551097421
4 6:0.67407415483
4 7:0.640062495431
4 8:0.625355308721
4 9:0.694851900308
4 10:0.756973367527
5 6:0.688009502815
5 7:0.66921432689
5 8:0.652207512074
5 9:0.712938037327
5 10:0.774648603871
6 7:0.171805594352
6 8:0.195507892674
6 9:0.140951544112
6 10:0.285832776718
7 8:0.0910623225966
7 9:0.140876378492
7 10:0.278674284819
8 9:0.12669381547
8 10:0.274583499256
9 10:0.246687809704
</hsp>