sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5F-6419-6406
X
>1Y95-B8-A15
X
>3R8T-A2027-A2011
X
>3OI0-A692-A654
X
>3R8O-A349-A336
X
>1Y99-B8-A15
X
>1Y95-A8-B15
X
>1Y6S-A8-B15
X
</seq>
<hsp>
0 1:0.296280516972
0 2:0.374945220155
0 3:0.419624801041
0 4:0.749695235488
0 5:0.254665863552
0 6:0.432761683365
0 7:0.37516182203
1 2:0.407568970508
1 3:0.435467884139
1 4:0.816169808017
1 5:0.360425194584
1 6:0.552242698649
1 7:0.379764441129
2 3:0.286804353285
2 4:0.811795356155
2 5:0.575231967353
2 6:0.699259679136
2 7:0.576606704278
3 4:0.999993622167
3 5:0.572457931544
3 6:0.711171893889
3 7:0.634822920505
4 5:0.741727179965
4 6:0.66367746048
4 7:0.595622826447
5 6:0.283627624369
5 7:0.277829779513
6 7:0.275227390946
</hsp>