sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1FJG-A607-A589
X
>3U5F-61639-61750
X
>2VQE-A607-A589
X
>1EFW-D44-D26
X
>2VQF-A607-A589
X
>3OI0-A63-A89
X
>3CCJ-02612-02640
X
>3OGY-A63-A89
X
</seq>
<hsp>
0 1:0.384250274213
0 2:0.162887521234
0 3:0.47855518268
0 4:0.275823755859
0 5:0.999998869411
0 6:0.823486449746
0 7:0.98846021634
1 2:0.397291492817
1 3:0.406973038184
1 4:0.468799982688
1 5:0.79041684183
1 6:0.573750748362
1 7:0.814086765942
2 3:0.435863644943
2 4:0.239349319354
2 5:0.946452535926
2 6:0.789725387606
2 7:0.955497789247
3 4:0.340170409188
3 5:0.577447815979
3 6:0.450110428202
3 7:0.605146116078
4 5:0.845646257988
4 6:0.738343983948
4 7:0.828490499034
5 6:0.365769885413
5 7:0.284622861043
6 7:0.367940018064
</hsp>