sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1I9V-A25-A43
X
>3KNH-A908-A1203
X
>3R8O-A1363-A1355
X
>1GAX-C24-C42
X
>1O3Z-B8-A15
X
>3R8O-A1125-A1143
X
>3KNH-A683-A645
X
</seq>
<hsp>
0 1:0.684378375545
0 2:0.987615992231
0 3:0.392326774026
0 4:0.407016212629
0 5:0.886404493331
0 6:0.969014992021
1 2:0.482714869137
1 3:0.764216643932
1 4:0.494824173904
1 5:0.704430398782
1 6:0.670806484262
2 3:0.886519408528
2 4:0.727052904483
2 5:0.999999513902
2 6:0.782389273112
3 4:0.39698287054
3 5:0.98089685482
3 6:0.929560342029
4 5:0.626693183606
4 6:0.623182481029
5 6:0.406876511017
</hsp>