sequences=18
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1YJN-02443-02393
X
>1JJ2-0671-0651
X
>2UXC-A1248-A1239
X
>2VQE-A220-A121
X
>3OI1-A2243-A2234
X
>2ZJR-X34-X378
X
>1YI2-0295-0311
X
>1M90-A2283-A2291
X
>1VQ7-02196-02177
X
>2UUA-A308-A325
X
>2J03-A509-A498
X
>3OGE-A1065-A1074
X
>1Q82-A81-A73
X
>3OI0-A709-A704
X
>3OHZ-A1283-A1267
X
>2VQE-A1271-A1218
X
>3G6E-02554-02604
X
>3F1F-A101-A70
X
</seq>
<hsp>
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</hsp>