sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A1671-A1651
X
>2VQE-A839-A834
X
>2J00-A839-A834
X
>3OHK-A2397-A2347
X
>3R8O-A317-A332
X
>2QEX-02200-02163
X
>3OI1-A2499-A2481
X
</seq>
<hsp>
0 1:0.820082771029
0 2:0.879820583919
0 3:0.99999986201
0 4:0.917591458731
0 5:0.752764702683
0 6:0.573618147737
1 2:0.381643189019
1 3:0.413152610896
1 4:0.421835911757
1 5:0.439679232186
1 6:0.588049594207
2 3:0.664977548379
2 4:0.618943325801
2 5:0.419837422831
2 6:0.631537125422
3 4:0.307489617653
3 5:0.5144977303
3 6:0.679916047218
4 5:0.396064547993
4 6:0.54497482035
5 6:0.297466578517
</hsp>