sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNI-A1049-A1067
X
>2UXC-A642-A719
X
>1N32-A642-A719
X
>2UUB-A642-A719
X
>1XMQ-A642-A719
X
>2VQF-A642-A719
X
>2VQE-A642-A719
X
>1FJG-A642-A719
X
</seq>
<hsp>
0 1:0.948845215897
0 2:0.999994985864
0 3:0.937148798343
0 4:0.894225010915
0 5:0.934681237066
0 6:0.892418040715
0 7:0.935430991183
1 2:0.381046314654
1 3:0.344716281242
1 4:0.370026678571
1 5:0.353609430623
1 6:0.402994361135
1 7:0.428554276626
2 3:0.449123110155
2 4:0.290802282573
2 5:0.451436787697
2 6:0.640567630871
2 7:0.560877854688
3 4:0.474625216199
3 5:0.528954699515
3 6:0.496541066175
3 7:0.361108747949
4 5:0.351879916081
4 6:0.492756758686
4 7:0.531254143935
5 6:0.311776231803
5 7:0.37079154194
6 7:0.303347179836
</hsp>