sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCJ-0317-0335
X
>2J03-A334-A352
X
>3CCV-0317-0335
X
>1YJ9-0317-0335
X
>3CMA-0317-0335
X
>1VQN-0317-0335
X
>1VQ5-0317-0335
X
>3OHK-A334-A352
X
>2QEX-0317-0335
X
>3CCL-0317-0335
X
>3CD6-0317-0335
X
>1FFK-0316-0334
X
>1YHQ-0317-0335
X
>1Q81-A317-A335
X
</seq>
<hsp>
0 1:0.697506113375
0 2:0.275046527004
0 3:0.459289431918
0 4:0.552129723018
0 5:0.351485523178
0 6:0.288901125674
0 7:0.623262272504
0 8:0.493676002722
0 9:0.287334632436
0 10:0.370053180682
0 11:0.417887713309
0 12:0.431923508305
0 13:0.569348167856
1 2:0.818212276663
1 3:0.710042330147
1 4:1.0
1 5:0.696712079494
1 6:0.603105420811
1 7:0.44143034319
1 8:0.556294692862
1 9:0.508207613851
1 10:0.628447069895
1 11:0.551597640035
1 12:0.685876420548
1 13:0.653032078487
2 3:0.502846236054
2 4:0.347223893612
2 5:0.248055660836
2 6:0.286640720257
2 7:0.737573731698
2 8:0.486754799635
2 9:0.354358725392
2 10:0.313217283641
2 11:0.428903529007
2 12:0.308782720729
2 13:0.563209064539
3 4:0.731199398246
3 5:0.495860814597
3 6:0.370909974614
3 7:0.820783499804
3 8:0.367472807365
3 9:0.348705909262
3 10:0.33708606765
3 11:0.540205625819
3 12:0.614281001891
3 13:0.498047542513
4 5:0.387806681576
4 6:0.497787501668
4 7:0.847576977336
4 8:0.747914895069
4 9:0.57346077814
4 10:0.504187408261
4 11:0.559224221306
4 12:0.342408191575
4 13:0.566662863252
5 6:0.16697704596
5 7:0.662788975468
5 8:0.446376734443
5 9:0.283486156471
5 10:0.232631857249
5 11:0.403457184284
5 12:0.234677662941
5 13:0.46102093404
6 7:0.636049454368
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6 9:0.169809245903
6 10:0.196219562229
6 11:0.386109385133
6 12:0.318582204864
6 13:0.414116521498
7 8:0.7128165989
7 9:0.522353539949
7 10:0.632593089096
7 11:0.396660007574
7 12:0.56765266642
7 13:0.634447607501
8 9:0.323750138247
8 10:0.306741569559
8 11:0.458641659219
8 12:0.510708636264
8 13:0.599777189911
9 10:0.180529243713
9 11:0.272684383137
9 12:0.342876520198
9 13:0.382649541476
10 11:0.306919158115
10 12:0.314248486543
10 13:0.395402944063
11 12:0.299365909805
11 13:0.414768067139
12 13:0.441403076916
</hsp>