sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8N-A5-A296
X
>1VQ8-02653-02655
X
>3CCU-02653-02655
X
>1Q82-A2653-A2655
X
>1VQK-02653-02655
X
>3CCM-02653-02655
X
>3CPW-02653-02655
X
>3G71-02653-02655
X
>3CD6-02653-02655
X
>3CCQ-02653-02655
X
>3CCS-02653-02655
X
>2OTL-02653-02655
X
>1YJN-02653-02655
X
</seq>
<hsp>
0 1:0.899424800505
0 2:0.987543831132
0 3:0.967435851378
0 4:0.847322015944
0 5:0.892079395732
0 6:0.915283585859
0 7:0.930496901939
0 8:0.903066702242
0 9:0.960525317927
0 10:0.999989863398
0 11:0.958703853681
0 12:0.950751091987
1 2:0.177860857573
1 3:0.136635293718
1 4:0.0991997378882
1 5:0.100179397721
1 6:0.0738358130052
1 7:0.208836947603
1 8:0.217891574621
1 9:0.129107718825
1 10:0.194632866332
1 11:0.201302061395
1 12:0.183640108348
2 3:0.126050818567
2 4:0.244187715815
2 5:0.248878363318
2 6:0.148212016401
2 7:0.181708543663
2 8:0.229250542591
2 9:0.140750097102
2 10:0.0870003956485
2 11:0.149736834818
2 12:0.158121574743
3 4:0.217634110117
3 5:0.19086634912
3 6:0.129270018364
3 7:0.119767109808
3 8:0.22983371321
3 9:0.117654705217
3 10:0.129306754649
3 11:0.134054120221
3 12:0.181755980592
4 5:0.11054648544
4 6:0.111876652779
4 7:0.277503458706
4 8:0.217192022907
4 9:0.198737973866
4 10:0.248261874806
4 11:0.247543084704
4 12:0.194107486375
5 6:0.125736352599
5 7:0.260764011502
5 8:0.270234746884
5 9:0.173193077648
5 10:0.25170570817
5 11:0.224740039394
5 12:0.213587459148
6 7:0.204864912923
6 8:0.19393700335
6 9:0.13498081846
6 10:0.152373183484
6 11:0.160657422817
6 12:0.12607011298
7 8:0.227412467791
7 9:0.174366176432
7 10:0.166884789268
7 11:0.143409014078
7 12:0.225545002017
8 9:0.205430822116
8 10:0.181016363209
8 11:0.209266419313
8 12:0.14898959015
9 10:0.138476617072
9 11:0.147310219677
9 12:0.155727514457
10 11:0.103440878119
10 12:0.11015654585
11 12:0.123932250683
</hsp>