sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CC4-02666-02753
X
>1VQ9-02666-02753
X
>2OTL-02666-02753
X
>2OTJ-02666-02753
X
>3G71-02666-02753
X
>1FFK-02618-02705
X
>3CPW-02666-02753
X
>1VQ4-02666-02753
X
>1JJ2-02666-02753
X
>1Q86-A2666-A2753
X
>1K8A-A2666-A2753
X
>1KD1-A2666-A2753
X
</seq>
<hsp>
0 1:0.455773189921
0 2:0.518497197036
0 3:0.176610943062
0 4:0.204700937674
0 5:0.999998283476
0 6:0.583431048109
0 7:0.391988231902
0 8:0.65571059386
0 9:0.577604860949
0 10:0.637902221121
0 11:0.641307646111
1 2:0.398696251027
1 3:0.469066725792
1 4:0.443413653964
1 5:0.648312786759
1 6:0.313914526706
1 7:0.253103847348
1 8:0.411978341439
1 9:0.377611433109
1 10:0.393868295865
1 11:0.423424760455
2 3:0.501396614019
2 4:0.502623292039
2 5:0.800281175592
2 6:0.512325539379
2 7:0.260484409503
2 8:0.486042114227
2 9:0.516477596114
2 10:0.478744239508
2 11:0.483199816013
3 4:0.150019720643
3 5:0.926788673143
3 6:0.608533397199
3 7:0.373588669416
3 8:0.680425905442
3 9:0.542535632131
3 10:0.619698336195
3 11:0.621784908413
4 5:0.899116641438
4 6:0.634872232972
4 7:0.337919536483
4 8:0.621060210081
4 9:0.50024102941
4 10:0.573552944159
4 11:0.575557464845
5 6:0.677339975689
5 7:0.68299526032
5 8:0.663430391811
5 9:0.511329215622
5 10:0.541103336002
5 11:0.556566278234
6 7:0.423091828055
6 8:0.451072352178
6 9:0.424032936274
6 10:0.429673512412
6 11:0.451996758628
7 8:0.385917723276
7 9:0.318163647023
7 10:0.347767852908
7 11:0.35295766015
8 9:0.303821108661
8 10:0.184780783245
8 11:0.199087206523
9 10:0.168353431815
9 11:0.170553588568
10 11:0.0540167703675
</hsp>