sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1VQM-0483-01349
X
>3CCJ-0483-01349
X
>1VQL-0483-01349
X
>3CXC-0483-01349
X
>3CC4-0483-01349
X
>3G71-0483-01349
X
>1JJ2-0483-01349
X
>3CMA-0483-01349
X
>1VQK-0483-01349
X
>1VQ8-0483-01349
X
>3CCM-0483-01349
X
>1VQ7-0483-01349
X
</seq>
<hsp>
0 1:0.738173540232
0 2:0.157501512889
0 3:0.677691416928
0 4:0.782486379756
0 5:0.597835121833
0 6:0.825133489195
0 7:0.466936268731
0 8:0.46872541314
0 9:0.365989208189
0 10:0.553790808772
0 11:0.570764772075
1 2:0.665297257902
1 3:0.62838663471
1 4:0.810325517105
1 5:0.665600070319
1 6:0.999998099904
1 7:0.853130653675
1 8:0.831138948273
1 9:0.761799479843
1 10:0.754365377486
1 11:0.801514045792
2 3:0.641860939838
2 4:0.697928001518
2 5:0.558636204155
2 6:0.79457452129
2 7:0.479965452717
2 8:0.444755748541
2 9:0.314938271756
2 10:0.493122701133
2 11:0.484176279641
3 4:0.420889937183
3 5:0.210048256955
3 6:0.446590556746
3 7:0.483855646987
3 8:0.421121146114
3 9:0.480713980416
3 10:0.393469271581
3 11:0.480482653551
4 5:0.3289958635
4 6:0.331057414083
4 7:0.496519467551
4 8:0.411078278238
4 9:0.445605968992
4 10:0.263463479297
4 11:0.317872647808
5 6:0.367446730832
5 7:0.371797631469
5 8:0.291985824269
5 9:0.342311402029
5 10:0.224098592294
5 11:0.356120886357
6 7:0.435415474739
6 8:0.367425640018
6 9:0.4945150789
6 10:0.344943536803
6 11:0.458072153323
7 8:0.227645284424
7 9:0.262825551883
7 10:0.288722455207
7 11:0.435573538733
8 9:0.155395990272
8 10:0.19722336642
8 11:0.279414946664
9 10:0.213807273296
9 11:0.250767740066
10 11:0.241778730332
</hsp>