sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CD6-0181-0417
X
>1VQ5-0181-0417
X
>2J03-A1526-A1527
X
>1VQK-0181-0417
X
>1VQP-0181-0417
X
>3CXC-0181-0417
X
>3CCR-0181-0417
X
>3CC2-0181-0417
X
>3I56-0181-0417
X
>3G6E-0181-0417
X
>1QVG-0181-0417
X
</seq>
<hsp>
0 1:0.754175237368
0 2:0.915137019762
0 3:0.810409569836
0 4:0.717179575806
0 5:0.65878560107
0 6:0.547604583653
0 7:0.59048961597
0 8:0.386303751299
0 9:0.415622330241
0 10:0.562225780133
1 2:0.909555362099
1 3:0.310684335451
1 4:0.219235332942
1 5:0.198513072647
1 6:0.412076401133
1 7:0.318093986898
1 8:0.591513711145
1 9:0.490429200859
1 10:0.396563711383
2 3:0.934940354043
2 4:0.832255040311
2 5:0.872441569105
2 6:0.99999854444
2 7:0.802948540136
2 8:0.919707765291
2 9:0.611394536096
2 10:0.795720189379
3 4:0.15865148268
3 5:0.219431829063
3 6:0.413481110647
3 7:0.265156793047
3 8:0.630757555498
3 9:0.553762495957
3 10:0.347752718945
4 5:0.136704886528
4 6:0.354903784992
4 7:0.179136811796
4 8:0.570672833247
4 9:0.436340162549
4 10:0.304324762271
5 6:0.302830021202
5 7:0.155460879775
5 8:0.490522017728
5 9:0.4173987592
5 10:0.267004032802
6 7:0.29756042183
6 8:0.531579755501
6 9:0.495228271076
6 10:0.426671258155
7 8:0.460610188787
7 9:0.347348366879
7 10:0.24977606143
8 9:0.389234738999
8 10:0.336452396585
9 10:0.328064822089
</hsp>