sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2UUB-A123-A315
X
>2ZJR-X69-X71
X
>2UXC-A123-A315
X
>3F1E-A123-A315
X
>2ZM5-D35-D37
X
>3OHY-A123-A315
X
>3U5F-6118-6393
X
</seq>
<hsp>
0 1:0.551238060298
0 2:0.168751743233
0 3:0.294918751398
0 4:0.757267134941
0 5:0.541778568184
0 6:0.721754826259
1 2:0.60848469903
1 3:0.618728911006
1 4:1.0
1 5:0.82990047158
1 6:0.971505021491
2 3:0.285963050525
2 4:0.73121387927
2 5:0.540264540507
2 6:0.692673136793
3 4:0.480135387865
3 5:0.340809850149
3 6:0.482418250695
4 5:0.348472821474
4 6:0.298765077401
5 6:0.235677145254
</hsp>