sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3B4B-B81-B104
X
>2H0X-B81-B104
X
>2UXC-A1226-A1263
X
>3G9C-R97-R122
X
>2HO7-B81-B104
X
>2NZ4-P97-P122
X
>3L3C-Q97-Q122
X
</seq>
<hsp>
0 1:0.158472112375
0 2:0.440908942159
0 3:0.990336694394
0 4:0.436817758141
0 5:0.619332402977
0 6:1.0
1 2:0.317830737187
1 3:0.89110949239
1 4:0.416432918222
1 5:0.540195428685
1 6:0.894484985194
2 3:0.824754957917
2 4:0.37983641181
2 5:0.352497678347
2 6:0.654379553496
3 4:0.879455319706
3 5:0.794570388234
3 6:0.769281092344
4 5:0.277719779335
4 6:0.680545934548
5 6:0.454607726079
</hsp>