sequences=22
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1M5O-E43-E42
X
>3F1F-A2578-A2577
X
>2QA4-02010-02009
X
>3F1H-A2578-A2577
X
>3OHY-A812-A811
X
>3U5H-52879-52878
X
>3KNH-W46-W45
X
>3OHC-A812-A811
X
>3OI0-A812-A811
X
>3OHD-A812-A811
X
>3F1E-A1048-A1047
X
>3F1G-A1048-A1047
X
>3OI0-A1048-A1047
X
>3OHY-A1048-A1047
X
>2J00-Y14-Y13
X
>2QA4-01974-01973
X
>3MUT-R23-R22
X
>1M5K-B43-B42
X
>3KNH-A875-A874
X
>2ZJR-Y81-Y80
X
>3KNK-A2168-A2167
X
>3F1G-A812-A811
X
</seq>
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