sequences=15
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2TRA-A59-A58
X
>3KNK-A2499-A2498
X
>3F4H-Y19-Y18
X
>3U5H-51558-51557
X
>3BT7-D12-D11
X
>2FMT-D61-D60
X
>3KNK-A1352-A1351
X
>3ADC-D75-D74
X
>2J03-A1347-A1346
X
>2J01-A1347-A1346
X
>3F2T-X72-X71
X
>3F4H-X24-X23
X
>3CME-01088-01087
X
>2QEX-01088-01087
X
>3CMA-01088-01087
X
</seq>
<hsp>
0 1:0.920235632276
0 2:0.243017474525
0 3:0.23561173128
0 4:0.538028626328
0 5:0.170277775529
0 6:0.238062174807
0 7:0.180689825448
0 8:0.320744028762
0 9:0.321463413908
0 10:0.235927348899
0 11:0.209773874217
0 12:0.153810164574
0 13:0.158118573898
0 14:0.122742990993
1 2:0.980412495081
1 3:0.932262783551
1 4:0.660164410875
1 5:0.803568795409
1 6:0.918884450056
1 7:0.822910094952
1 8:0.838937037747
1 9:0.839229692877
1 10:0.999999904965
1 11:0.910103354496
1 12:0.9455283394
1 13:0.965612408795
1 14:0.922455624267
2 3:0.132769276598
2 4:0.516710992107
2 5:0.242101851379
2 6:0.246444452821
2 7:0.197553496531
2 8:0.261976771124
2 9:0.264882034044
2 10:0.0455800674209
2 11:0.0963625558657
2 12:0.203671123917
2 13:0.167859270774
2 14:0.190912897888
3 4:0.437966176793
3 5:0.18145480633
3 6:0.132672106937
3 7:0.158235896059
3 8:0.164198906763
3 9:0.166156722326
3 10:0.132476911834
3 11:0.127614185183
3 12:0.153902332514
3 13:0.125558950874
3 14:0.161072507888
4 5:0.421424456352
4 6:0.423662905334
4 7:0.415887424674
4 8:0.317582531214
4 9:0.316273936968
4 10:0.531539777824
4 11:0.474198576878
4 12:0.505423772156
4 13:0.509091208788
4 14:0.504939469427
5 6:0.183275433068
5 7:0.0844137005035
5 8:0.207520233791
5 9:0.208814952392
5 10:0.245837958968
5 11:0.173162880993
5 12:0.162629116155
5 13:0.175346748437
5 14:0.138201354403
6 7:0.180240281718
6 8:0.155443919726
6 9:0.154030231355
6 10:0.240325406471
6 11:0.220189718684
6 12:0.153451094061
6 13:0.151827308785
6 14:0.182086456726
7 8:0.18716551866
7 9:0.188859834126
7 10:0.210959209173
7 11:0.131427196962
7 12:0.171883184065
7 13:0.175214703337
7 14:0.151136348483
8 9:0.0059403026709
8 10:0.267040659002
8 11:0.216401983288
8 12:0.229107246385
8 13:0.230973517892
8 14:0.243921138122
9 10:0.269598671545
9 11:0.219337072946
9 12:0.229771371287
9 13:0.231992241929
9 14:0.245101916501
10 11:0.101136126007
10 12:0.183057965223
10 13:0.143362726512
10 14:0.172806837303
11 12:0.163254252383
11 13:0.142505180363
11 14:0.139754601158
12 13:0.0507722735924
12 14:0.0541701672996
13 14:0.0661129999617
</hsp>