sequences=10
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH5-A1705-A795
X
>3OH7-A1705-A795
X
>3OHJ-A1705-A795
X
>3OHK-A1705-A795
X
>3U5H-51949-5869
X
>3U5D-11945-1863
X
>3OHZ-A1705-A795
X
>3OI1-A1705-A795
X
>2J03-A1705-A795
X
>2J01-A1705-A795
X
</seq>
<hsp>
0 1:0.0939650209666
0 2:0.104427250671
0 3:0.111140410831
0 4:0.778647674162
0 5:0.696745461222
0 6:0.255742635179
0 7:0.270093987777
0 8:0.497323764159
0 9:0.468579275061
1 2:0.11812465799
1 3:0.0919672465537
1 4:0.801680356794
1 5:0.721511967649
1 6:0.211745965111
1 7:0.214318639836
1 8:0.462589477251
1 9:0.432248453455
2 3:0.0752259800044
2 4:0.792403756719
2 5:0.718012712104
2 6:0.193763911391
2 7:0.206524754531
2 8:0.425813125745
2 9:0.39822942516
3 4:0.793439232633
3 5:0.711623985496
3 6:0.198970911767
3 7:0.198726939913
3 8:0.450642300145
3 9:0.423441167376
4 5:0.273791498624
4 6:0.89581765561
4 7:0.904550672738
4 8:0.999994540038
4 9:0.994606392468
5 6:0.829009031221
5 7:0.832682713697
5 8:0.937061790387
5 9:0.927509350005
6 7:0.0615646590619
6 8:0.310135521898
6 9:0.282226375396
7 8:0.33370856473
7 9:0.305220157227
8 9:0.052778290015
</hsp>