ClaRNA

Doublet Group info: classifier/stacking/<</AC/sub-004

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: <</AC/sub-004
Members:
count: 37
download members
1YIJ:02008:02007
1VQ6:02008:02007
1Q86:A2008:A2007
3R8T:A981:A980
2VQF:A1294:A1293
2J01:A1792:A1791
2J03:A1792:A1791
1K8A:A2008:A2007
1S72:02417:02416
1VQN:02008:02007
1FFK:02370:02369
1VQL:02417:02416
1YHQ:02417:02416
1FFK:02596:02595
3CPW:02008:02007
1K8A:A2417:A2416
1NJI:A2008:A2007
2QA4:02007:02006
1KD1:A2008:A2007
1K9M:A2644:A2643
3CCU:02008:02007
3CME:02417:02416
3CCM:02417:02416
1FFK:01961:01960
1VQ5:01029:01028
1QVG:02417:02416
1Q86:A2417:A2416
1KD1:A2644:A2643
3G78:A138:A137
3CCU:02417:02416
3CCV:02417:02416
3CD6:02417:02416
1VQ8:01045:01044
1QVG:02644:02643
3U5F:6408:6407
2J01:A1617:A1616
2J03:A1617:A1616
Closest classifer groups: show all      show selected
Group Members RMSD
base-phosphate/H_7BPh 1 0.047
stacking/<< 5 0.115
stacking/<> 18 0.126
stacking/>> 2 0.152
base-ribose/W_5BR 3 0.182
base-ribose/W_6BR 2 0.188
base-phosphate/H_9BPh 1 0.261
base-phosphate/H_0BPh 62 0.262
base-ribose/H_9BR 1 0.263
base-phosphate/SW_2BPh 3 0.279

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol