sequences=17
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1Q82-A2106-A2105
X
>3F1F-A1660-A1659
X
>3KNK-A1791-A1790
X
>3F1H-A1122-A1121
X
>3F1F-A1122-A1121
X
>2DRB-B34-B33
X
>3OI0-A372-A371
X
>1KD1-A1976-A1975
X
>3U5F-61230-61229
X
>1M90-A1976-A1975
X
>3L3C-P6-P5
X
>2ZZM-B68-B67
X
>1K8A-A1976-A1975
X
>3OGY-A1305-A1304
X
>3CD6-01976-01975
X
>3F1F-B28-B27
X
>3OGE-A1180-A1179
X
</seq>
<hsp>
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0 2:0.776352879587
0 3:0.187958229013
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0 5:0.414849988725
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</hsp>