sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCJ-02308-0907
X
>1VQM-02308-0907
X
>3G71-02308-0907
X
>1VQ5-02308-0907
X
>3G6E-02308-0907
X
>3CD6-02308-0907
X
>3CPW-02308-0907
X
>1VQK-02308-0907
X
>1YIT-02308-0907
X
>3CC2-02308-0907
X
>3CXC-02308-0907
X
>1Q86-A2308-A907
X
>1K8A-A2308-A907
X
</seq>
<hsp>
0 1:0.767791202903
0 2:0.526940416701
0 3:0.758404301459
0 4:0.5933298417
0 5:0.527578346794
0 6:0.566911938159
0 7:0.679138349387
0 8:0.752032482954
0 9:0.610820067803
0 10:0.550616565328
0 11:0.752816922954
0 12:1.0
1 2:0.395414809618
1 3:0.415351997706
1 4:0.388525451866
1 5:0.690974306898
1 6:0.375962941106
1 7:0.318367920466
1 8:0.458774997745
1 9:0.432727340848
1 10:0.556988239033
1 11:0.491905114614
1 12:0.930608273753
2 3:0.37284875363
2 4:0.184898035579
2 5:0.418446959692
2 6:0.204126192622
2 7:0.329092150805
2 8:0.41075783913
2 9:0.266346994014
2 10:0.376679943062
2 11:0.302241964688
2 12:0.688911971808
3 4:0.258523338586
3 5:0.695877744515
3 6:0.499099754459
3 7:0.423833574871
3 8:0.178639862649
3 9:0.229480291267
3 10:0.511677137507
3 11:0.315341010619
3 12:0.686370722161
4 5:0.563363228713
4 6:0.321781607799
4 7:0.39904420589
4 8:0.246177703057
4 9:0.22976262373
4 10:0.456786614203
4 11:0.287764897194
4 12:0.659753372048
5 6:0.374416465235
5 7:0.453397419582
5 8:0.761761754189
5 9:0.50084331619
5 10:0.324079861811
5 11:0.567432188845
5 12:0.759377499114
6 7:0.284134560197
6 8:0.530775151377
6 9:0.376456749522
6 10:0.359922926093
6 11:0.41737842947
6 12:0.746638826932
7 8:0.516435185767
7 9:0.338538197376
7 10:0.286159713568
7 11:0.436693122983
7 12:0.820636869286
8 9:0.311476438481
8 10:0.581155193452
8 11:0.357319814406
8 12:0.690199883852
9 10:0.368107675974
9 11:0.26503449314
9 12:0.623689760244
10 11:0.50123306707
10 12:0.751891320741
11 12:0.520639938719
</hsp>