sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3D0U-A160-A159
X
>3F1F-A2437-A2436
X
>3CMA-0429-0428
X
>2ZJR-X1916-X1915
X
>3CCM-0429-0428
X
>2OTL-0429-0428
X
>1VQ9-0429-0428
X
>1K9M-A429-A428
X
>3F1H-A2045-A2044
X
>3CXC-0429-0428
X
>1VQK-0429-0428
X
>3CCS-0429-0428
X
</seq>
<hsp>
0 1:0.506533591497
0 2:0.488385341515
0 3:0.82781675501
0 4:0.539668250464
0 5:0.507997865387
0 6:0.281524635674
0 7:0.743893386801
0 8:0.595863099361
0 9:0.45041891971
0 10:0.43665145771
0 11:0.394906434771
1 2:0.855187589689
1 3:0.959503011673
1 4:0.894724241036
1 5:0.796645480389
1 6:0.667158027013
1 7:1.0
1 8:0.820157392444
1 9:0.667961927737
1 10:0.793909774565
1 11:0.631721457884
2 3:0.775761270651
2 4:0.118458471925
2 5:0.202937535478
2 6:0.283888968187
2 7:0.34895816446
2 8:0.563399827848
2 9:0.406875347336
2 10:0.288205659598
2 11:0.377588713287
3 4:0.778999321297
3 5:0.736197124828
3 6:0.824697061922
3 7:0.834896589699
3 8:0.354827578261
3 9:0.778151983838
3 10:0.828164455059
3 11:0.76292882039
4 5:0.181995948007
4 6:0.297109429522
4 7:0.292298881412
4 8:0.562022887874
4 9:0.388212278927
4 10:0.247797163729
4 11:0.363333375756
5 6:0.31093777861
5 7:0.244917393157
5 8:0.531592879949
5 9:0.255370450659
5 10:0.248600623391
5 11:0.339961271077
6 7:0.526074943101
6 8:0.56738954999
6 9:0.327079787707
6 10:0.213854826052
6 11:0.231832584639
7 8:0.678814961662
7 9:0.438181200452
7 10:0.420082798959
7 11:0.52616359728
8 9:0.528133461492
8 10:0.546589929897
8 11:0.486848393921
9 10:0.247838280611
9 11:0.293783903274
10 11:0.257155338557
</hsp>