sequences=23
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH5-A1832-A1831
X
>3KNK-A2029-A2028
X
>3U5D-11818-11817
X
>1N32-A684-A683
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>3CCJ-01717-01716
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X
>1FJG-A684-A683
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>2BBV-N6-N5
X
>2J02-V37-V36
X
>2UXC-A973-A972
X
>1OOA-C26-C25
X
>1VQ8-02596-02595
X
>1VQ9-02596-02595
X
>3G4M-A37-A36
X
>2VQF-A973-A972
X
>3U5H-52859-52858
X
>2V3C-M83-M82
X
>3RKF-D37-D36
X
>3OH5-A2552-A2551
X
>3OH7-A2552-A2551
X
>3R8O-A165-A164
X
>3R8T-A2579-A2578
X
>3R8T-A1366-A1365
X
</seq>
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