sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHC-A1212-A1211
X
>3CCM-01166-01165
X
>3OHY-A1212-A1211
X
>3OGE-A1212-A1211
X
>3CCL-0617-0607
X
>1YJN-0617-0607
X
>3CMA-0617-0607
X
>3CCE-0617-0607
X
>1YJW-0617-0607
X
>3CCU-0617-0607
X
>3CC4-0617-0607
X
>3CCS-0617-0607
X
>1YIT-0617-0607
X
>2OTJ-0617-0607
X
>1YHQ-0617-0607
X
>1VQ6-0617-0607
X
</seq>
<hsp>
0 1:0.617900815119
0 2:0.296156195552
0 3:0.306836214933
0 4:0.908302152901
0 5:0.9563420795
0 6:0.895906501825
0 7:1.0
0 8:0.933640153223
0 9:0.895572029014
0 10:0.900483811605
0 11:0.924018965912
0 12:0.891985495146
0 13:0.891795636
0 14:0.891138354671
0 15:0.924223418193
1 2:0.539695979347
1 3:0.52189070539
1 4:0.808651162578
1 5:0.903626274702
1 6:0.781307483955
1 7:0.860053573944
1 8:0.83734099813
1 9:0.788997459588
1 10:0.791184074489
1 11:0.80553610643
1 12:0.803255829491
1 13:0.737635371015
1 14:0.768215327911
1 15:0.785409323542
2 3:0.222894619338
2 4:0.894515142943
2 5:0.973794800342
2 6:0.919307007048
2 7:0.963832094012
2 8:0.950594533204
2 9:0.875984672634
2 10:0.90058101669
2 11:0.912728417138
2 12:0.902750251303
2 13:0.881716901616
2 14:0.898781582407
2 15:0.911798102401
3 4:0.762003589814
3 5:0.838886327394
3 6:0.791675226728
3 7:0.835026981861
3 8:0.814088751909
3 9:0.741012332999
3 10:0.760460046247
3 11:0.764580762834
3 12:0.77002576464
3 13:0.757710196918
3 14:0.742181273833
3 15:0.76915679184
4 5:0.137829402125
4 6:0.179376961348
4 7:0.15272210467
4 8:0.15258548754
4 9:0.0735390091982
4 10:0.102604024781
4 11:0.0973295405797
4 12:0.10019903112
4 13:0.127803855337
4 14:0.152329863976
4 15:0.113037955589
5 6:0.178330591804
5 7:0.205508909472
5 8:0.121089148491
5 9:0.165289867808
5 10:0.145734664335
5 11:0.169587920285
5 12:0.108150297126
5 13:0.196525129373
5 14:0.20721578434
5 15:0.184736439836
6 7:0.271450700159
6 8:0.106574269572
6 9:0.207192777641
6 10:0.138233381705
6 11:0.200886548206
6 12:0.114767040884
6 13:0.129000396152
6 14:0.188713448185
6 15:0.196756002868
7 8:0.213031243018
7 9:0.120137089671
7 10:0.17108230446
7 11:0.145209447492
7 12:0.189991448565
7 13:0.181923390186
7 14:0.234661917605
7 15:0.142447708032
8 9:0.162381835372
8 10:0.0826708279267
8 11:0.149192643968
8 12:0.0798403273614
8 13:0.138899851144
8 14:0.169836431544
8 15:0.148745254501
9 10:0.0949095473012
9 11:0.0799972264522
9 12:0.110735098933
9 13:0.12293291272
9 14:0.153201848146
9 15:0.0810490445846
10 11:0.0813707278242
10 12:0.0709681501568
10 13:0.103644145063
10 14:0.12124428322
10 15:0.0856506490807
11 12:0.125462578571
11 13:0.144190846653
11 14:0.0980546526184
11 15:0.0607330363614
12 13:0.102609373042
12 14:0.149819062501
12 15:0.119765782125
13 14:0.166041955812
13 15:0.11799983725
14 15:0.108762594375
</hsp>