sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3RKF-A50-A46
X
>301D-B6-A9
X
>3RKF-B50-B46
X
>3U5B-21498-21362
X
>300D-B6-A9
X
>299D-B6-A9
X
>3U5F-61510-61374
X
>1NYI-B5-A9
X
</seq>
<hsp>
0 1:0.847458388868
0 2:0.286619603517
0 3:0.340461779511
0 4:0.585943832409
0 5:0.534528481769
0 6:0.326798474822
0 7:0.461999022046
1 2:1.0
1 3:0.660252444901
1 4:0.661697075473
1 5:0.639780040886
1 6:0.695269919379
1 7:0.643230730382
2 3:0.41065897279
2 4:0.718048345819
2 5:0.508968196167
2 6:0.372660050167
2 7:0.451504240172
3 4:0.606153297496
3 5:0.309913910837
3 6:0.177032044687
3 7:0.303438714205
4 5:0.612276714155
4 6:0.575123846585
4 7:0.516899630257
5 6:0.347705099193
5 7:0.257004806679
6 7:0.222540910593
</hsp>