sequences=15
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F1G-Y13-Y21
X
>3F1E-Y13-Y21
X
>1QF6-B13-B20
X
>1O0B-B12-B18
X
>3AKZ-H13-H19
X
>3AKZ-G13-G19
X
>3KNI-A2729-A2724
X
>2J00-V13-V21
X
>2AZX-D13-D19
X
>3KNK-A2671-A2446
X
>3KNK-A2729-A2724
X
>3GCA-A12-A30
X
>3AKZ-E13-E19
X
>3R8S-A642-A2362
X
>1EFW-D13-D21
X
</seq>
<hsp>
0 1:0.0222378532357
0 2:0.461946021252
0 3:0.430457240325
0 4:0.461745743306
0 5:0.522925556239
0 6:0.844210733102
0 7:0.29290654898
0 8:0.268075867327
0 9:0.745939214159
0 10:0.974242167606
0 11:0.7335473984
0 12:0.624372921993
0 13:0.734289504372
0 14:0.651951638564
1 2:0.451521426254
1 3:0.422027881965
1 4:0.455997223076
1 5:0.512015398143
1 6:0.829519965829
1 7:0.28226430373
1 8:0.258199306333
1 9:0.737429977943
1 10:0.965984088274
1 11:0.72297903996
1 12:0.6126921345
1 13:0.725824675499
1 14:0.6423247481
2 3:0.186839916133
2 4:0.459645894098
2 5:0.264676583695
2 6:0.64640407207
2 7:0.383707058835
2 8:0.401020918554
2 9:0.704058732582
2 10:0.962511001276
2 11:0.729545447146
2 12:0.534831976849
2 13:0.682516086462
2 14:0.625997816586
3 4:0.360720907772
3 5:0.349416261255
3 6:0.686690480112
3 7:0.418523914401
3 8:0.394960574697
3 9:0.733974085957
3 10:1.0
3 11:0.771278496577
3 12:0.643040687324
3 13:0.69958527715
3 14:0.664827869886
4 5:0.464556735845
4 6:0.643222267482
4 7:0.409555262168
4 8:0.337494399604
4 9:0.678657452816
4 10:0.791124289228
4 11:0.610250826329
4 12:0.705219702076
4 13:0.520519227091
4 14:0.53157719245
5 6:0.581042908359
5 7:0.321619864818
5 8:0.371383824099
5 9:0.523039569111
5 10:0.768552267393
5 11:0.578013417853
5 12:0.352723477012
5 13:0.48200379272
5 14:0.43644926696
6 7:0.697945150249
6 8:0.618790067174
6 9:0.868974641753
6 10:0.803638852313
6 11:0.481479195431
6 12:0.63351102813
6 13:0.565092155519
6 14:0.516049147863
7 8:0.207283310539
7 9:0.497196373046
7 10:0.726871423245
7 11:0.535682423027
7 12:0.405962976378
7 13:0.502089210413
7 14:0.431469211929
8 9:0.625917378776
8 10:0.783077487858
8 11:0.491474008003
8 12:0.4663319935
8 13:0.498246846496
8 14:0.406049785741
9 10:0.558986119851
9 11:0.618744877633
9 12:0.523179944493
9 13:0.458121488753
9 14:0.500445073848
10 11:0.485519042301
10 12:0.722134153266
10 13:0.397455378069
10 14:0.490347733957
11 12:0.485824247714
11 13:0.281772565147
11 14:0.18871443831
12 13:0.50066534502
12 14:0.381662183262
13 14:0.178589569125
</hsp>