sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHZ-A209-A207
X
>3OI1-A209-A207
X
>3F1F-A212-A210
X
>3F1H-A212-A210
X
>3OHK-A209-A207
X
>3OHJ-A209-A207
X
>2ZJR-X204-X202
X
>1U9S-A140-A137
X
</seq>
<hsp>
0 1:0.0429814050774
0 2:0.432934066943
0 3:0.447264925909
0 4:0.518209571336
0 5:0.517124495743
0 6:0.753417964022
0 7:0.990383986276
1 2:0.432317159515
1 3:0.446473829393
1 4:0.510165886913
1 5:0.510594972476
1 6:0.738042963233
1 7:0.999995987206
2 3:0.0284411556446
2 4:0.411987345646
2 5:0.406659235006
2 6:0.673749476465
2 7:0.797814717046
3 4:0.405078220163
3 5:0.399330847136
3 6:0.669763350828
3 7:0.782898017556
4 5:0.030139626915
4 6:0.739177191024
4 7:0.939068507107
5 6:0.735687645788
5 7:0.917159105574
6 7:0.959078551001
</hsp>