sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2ZZN-C15-C57
X
>2QA4-01654-01445
X
>1FFK-01608-01399
X
>1VQM-01655-01446
X
>1VQK-01655-01446
X
>1VQO-01655-01446
X
>3CCS-01655-01446
X
>3CXC-01655-01446
X
>1Q81-A1655-A1446
X
>3CMA-01655-01446
X
>1M90-A1655-A1446
X
>3CC7-01655-01446
X
</seq>
<hsp>
0 1:0.766025028855
0 2:0.758211093725
0 3:0.996338638045
0 4:1.0
0 5:0.924834424766
0 6:0.831742757228
0 7:0.76523919248
0 8:0.760790233896
0 9:0.993457655775
0 10:0.844217347031
0 11:0.906886735784
1 2:0.206488282264
1 3:0.324988948872
1 4:0.339919153789
1 5:0.305059476371
1 6:0.392381598709
1 7:0.216266403442
1 8:0.358984277418
1 9:0.386057494184
1 10:0.327654587575
1 11:0.361336147844
2 3:0.264155135429
2 4:0.267251625593
2 5:0.208142809248
2 6:0.234635984121
2 7:0.0897312284224
2 8:0.196809906667
2 9:0.285139199947
2 10:0.180278313816
2 11:0.24188859913
3 4:0.0534377324858
3 5:0.10470350879
3 6:0.315182129332
3 7:0.247491098289
3 8:0.337044408069
3 9:0.145442213962
3 10:0.21570718875
3 11:0.215647118284
4 5:0.0887285123682
4 6:0.304605894964
4 7:0.248480567132
4 8:0.350092919851
4 9:0.116418485466
4 10:0.201337391816
4 11:0.216620662173
5 6:0.248091030569
5 7:0.191026875661
5 8:0.292253570698
5 9:0.11197393967
5 10:0.123743817662
5 11:0.209283455518
6 7:0.226419279352
6 8:0.223199790358
6 9:0.240756324672
6 10:0.154557521231
6 11:0.256071750476
7 8:0.202043885918
7 9:0.271816369825
7 10:0.156132479286
7 11:0.187247379827
8 9:0.350086810207
8 10:0.222842843589
8 11:0.249863942322
9 10:0.170271749226
9 11:0.249920254571
10 11:0.207248782487
</hsp>