sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNI-A1616-A1908
X
>3OI1-A1617-A1909
X
>3OH5-A1617-A1909
X
>3OHJ-A1617-A1909
X
>3OHZ-A1617-A1909
X
>3OHK-A1617-A1909
X
>3OH7-A1617-A1909
X
>2ZJR-X1595-X1858
X
</seq>
<hsp>
0 1:0.266989031955
0 2:0.493845738128
0 3:0.453717923199
0 4:0.282856702432
0 5:0.51439279995
0 6:0.506236163844
0 7:0.999992839866
1 2:0.376145218142
1 3:0.243276055509
1 4:0.118480358897
1 5:0.29697271044
1 6:0.370673360727
1 7:0.926131784416
2 3:0.318215315634
2 4:0.40370328285
2 5:0.370788244719
2 6:0.0763689804817
2 7:0.715929909878
3 4:0.287027105772
3 5:0.117183045555
3 6:0.280996993459
3 7:0.818302153204
4 5:0.365291779663
4 6:0.406878415118
4 7:0.95130401949
5 6:0.321663565813
5 7:0.815081095181
6 7:0.695763483165
</hsp>