ClaRNA

Doublet Group info: classifier/base-phosphate/SW_2BPh/AA/sub-001

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: base-phosphate
Desc: SW_2BPh/AA/sub-001
Members:
count: 58
download members
3CCM:0304:0325
1YJW:0304:0325
1VQP:0304:0325
1M90:A304:A325
1VQK:0304:0325
3CPW:0304:0325
1VQN:0304:0325
3I56:0304:0325
1YI2:0304:0325
3R8T:A308:A329
1VQM:0304:0325
2OTL:0304:0325
1YJN:0304:0325
1K8A:A304:A325
3R8S:A308:A329
3CCJ:0304:0325
1VQ5:0304:0325
2OTJ:0304:0325
1YIJ:0304:0325
1NJI:A304:A325
1KD1:A304:A325
3CCQ:0304:0325
1VQO:0304:0325
1VQ7:0304:0325
1S72:0304:0325
1VQ8:0304:0325
1JJ2:0304:0325
1VQL:0304:0325
2QEX:0304:0325
1VQ4:0304:0325
1VQ9:0304:0325
1Q82:A304:A325
3CCE:0304:0325
3CCR:0304:0325
3CCV:0304:0325
1YHQ:0304:0325
3CCL:0304:0325
1K9M:A304:A325
3CME:0304:0325
3CXC:0304:0325
1N8R:A304:A325
3CC2:0304:0325
3G71:0304:0325
1YIT:0304:0325
3CC4:0304:0325
1Q86:A304:A325
1YJ9:0304:0325
3CC7:0304:0325
3CMA:0304:0325
3CD6:0304:0325
3G6E:0304:0325
1QVG:0304:0325
1VQ6:0304:0325
3CCS:0304:0325
1Q81:A304:A325
2QA4:0304:0325
3CCU:0304:0325
1FFK:0303:0324
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/>< 11 0.121
base-phosphate/SW_2BPh 167 0.173
stacking/<< 3 0.174
stacking/>> 81 0.243
base-phosphate/S_1BPh 6 0.263
base-ribose/W_4BR 80 0.275
base-ribose/W_6BR 4 0.280
base-ribose/H_0BR 4 0.333
base-ribose/W_3BR 4 0.362
base-ribose/H_7BR 4 0.386

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol