sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J02-A968-A1023
X
>3OHK-A443-A246
X
>3OHJ-A443-A246
X
>3OHZ-A443-A246
X
>3OI1-A443-A246
X
>3OH7-A443-A246
X
>3OH5-A443-A246
X
>2J03-A443-A246
X
>2J01-A443-A246
X
</seq>
<hsp>
0 1:0.980887518532
0 2:0.98320617329
0 3:0.990548962276
0 4:0.988801880174
0 5:0.999999473493
0 6:0.999617782801
0 7:0.991967659418
0 8:0.99271355205
1 2:0.0120370136645
1 3:0.0269605078405
1 4:0.0326581933958
1 5:0.0347389593205
1 6:0.0359720203266
1 7:0.075935055412
1 8:0.0757095024522
2 3:0.0297656153256
2 4:0.0378848486955
2 5:0.0346001785899
2 6:0.0333066020638
2 7:0.0799004417416
2 8:0.0793211033885
3 4:0.0121120702235
3 5:0.0200437575445
3 6:0.0218519289878
3 7:0.0583043546689
3 8:0.0575403896939
4 5:0.0230020605285
4 6:0.027271411421
4 7:0.0530626541911
4 8:0.0521592185028
5 6:0.0101456073442
5 7:0.0562703383949
5 8:0.0547665034361
6 7:0.0616625475788
6 8:0.0598868660355
7 8:0.00518344977123
</hsp>