sequences=18
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CME-02271-0208
X
>2OTJ-02271-0208
X
>3CXC-02271-0208
X
>3CPW-02271-0208
X
>1VQP-02271-0208
X
>1VQL-02271-0208
X
>1VQM-02271-0208
X
>1YHQ-02271-0208
X
>1VQK-02271-0208
X
>1VQN-02271-0208
X
>3CCM-02271-0208
X
>3G6E-02271-0208
X
>3CMA-02271-0208
X
>1VQO-02271-0208
X
>3CC4-02271-0208
X
>1VQ8-02271-0208
X
>3CCE-02271-0208
X
>1QVG-02271-0208
X
</seq>
<hsp>
0 1:0.772214163699
0 2:0.76434176726
0 3:0.750808461256
0 4:0.657023058749
0 5:0.631646436879
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0 14:1.0
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16 17:0.452943495093
</hsp>