sequences=10
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH7-A1641-A1692
X
>3OH5-A1641-A1692
X
>3OHZ-A1641-A1692
X
>3OI1-A1641-A1692
X
>3OHJ-A1641-A1692
X
>3OHK-A1641-A1692
X
>3KNK-A1640-A1691
X
>2ZJR-X1619-X1660
X
>2J03-A1641-A1692
X
>2J01-A1641-A1692
X
</seq>
<hsp>
0 1:0.0649356345708
0 2:0.316410408271
0 3:0.311906489614
0 4:0.406601045555
0 5:0.388132543099
0 6:0.997323900178
0 7:0.579111394131
0 8:0.629668056092
0 9:0.616266050226
1 2:0.31966495834
1 3:0.321962725195
1 4:0.409126327076
1 5:0.396547231822
1 6:1.0
1 7:0.581594036617
1 8:0.632727948404
1 9:0.619576536007
2 3:0.0483018943025
2 4:0.209907231558
2 5:0.216442069844
2 6:0.761186666027
2 7:0.307315470584
2 8:0.431367336771
2 9:0.416253160797
3 4:0.208333223788
3 5:0.206578771563
3 6:0.756527377585
3 7:0.302869418514
3 8:0.420394241357
3 9:0.404700759405
4 5:0.0615501652498
4 6:0.705314368651
4 7:0.279696000117
4 8:0.312831176404
4 9:0.299688698002
5 6:0.738920252352
5 7:0.302414230288
5 8:0.305214800902
5 9:0.293018922717
6 7:0.52467605404
6 8:0.661977002867
6 9:0.654283401243
7 8:0.319589448456
7 9:0.306276708307
8 9:0.0305346326783
</hsp>