sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2EES-A49-A47
X
>2G9C-A49-A47
X
>1Y27-X50-X48
X
>3DS7-A49-A47
X
>1U8D-A49-A47
X
>3FO4-A47-A45
X
>2XNZ-A48-A46
X
>3GAO-A49-A47
X
>2EET-A49-A47
X
>2EEU-A49-A47
X
>3DS7-B49-B47
X
>3FO6-A49-A47
X
</seq>
<hsp>
0 1:0.433024289262
0 2:0.999996918863
0 3:0.594628606316
0 4:0.308131705008
0 5:0.320418748347
0 6:0.420207582268
0 7:0.44800535761
0 8:0.311788514998
0 9:0.536831154617
0 10:0.56730911789
0 11:0.402637663249
1 2:0.710282131037
1 3:0.323304486827
1 4:0.208291460042
1 5:0.198204887982
1 6:0.176413483371
1 7:0.389056333034
1 8:0.290797802639
1 9:0.271093058173
1 10:0.294429452365
1 11:0.268204307728
2 3:0.636439468548
2 4:0.871397611545
2 5:0.714827236584
2 6:0.677366411774
2 7:0.764958971491
2 8:0.752457367807
2 9:0.657057660687
2 10:0.579151335733
2 11:0.625433856843
3 4:0.401296953084
3 5:0.370441143156
3 6:0.273553881663
3 7:0.342861219871
3 8:0.369662160961
3 9:0.204244211203
3 10:0.279698789457
3 11:0.301692772291
4 5:0.226621366779
4 6:0.242575650877
4 7:0.363027361577
4 8:0.241478610782
4 9:0.327676579689
4 10:0.392577909753
4 11:0.312726576512
5 6:0.220102963229
5 7:0.279667400927
5 8:0.181365362231
5 9:0.283556510214
5 10:0.356851997109
5 11:0.1554747129
6 7:0.36909768225
6 8:0.227761357943
6 9:0.255629114667
6 10:0.219987647801
6 11:0.205466122008
7 8:0.254042641143
7 9:0.299707829649
7 10:0.440779500074
7 11:0.244755530977
8 9:0.330086066755
8 10:0.321734479911
8 11:0.161971011408
9 10:0.341937001303
9 11:0.257595749837
10 11:0.278209290718
</hsp>