sequences=15
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J00-A410-A413
X
>2J02-A410-A413
X
>1IVS-D53-D16
X
>2VQE-A1112-A1115
X
>2VQF-A1112-A1115
X
>2BTE-E56-E17
X
>3KNH-W53-W16
X
>1YFG-A53-A16
X
>2BTE-B56-B17
X
>1GAX-C53-C16
X
>1QU3-T55-T17
X
>2AZX-D53-D16
X
>2ZZN-D53-D16
X
>2CV2-C53-C16
X
>1G59-B53-B16
X
</seq>
<hsp>
0 1:0.0112720925487
0 2:0.689349030158
0 3:0.325422547409
0 4:0.325422547409
0 5:0.63958928366
0 6:0.666425285476
0 7:0.747161996747
0 8:0.654405314888
0 9:0.479150095925
0 10:0.69902641572
0 11:0.769637410852
0 12:0.873034711568
0 13:0.968171982226
0 14:0.999994480696
1 2:0.686854288556
1 3:0.321316533435
1 4:0.321316533435
1 5:0.63911841274
1 6:0.664696609688
1 7:0.746639278581
1 8:0.652140416592
1 9:0.478741174218
1 10:0.697902155259
1 11:0.765614559725
1 12:0.870609990409
1 13:0.965874190488
1 14:0.998015214708
2 3:0.55219259276
2 4:0.55219259276
2 5:0.525385541546
2 6:0.559875476634
2 7:0.369896714802
2 8:0.49042961435
2 9:0.50631646724
2 10:0.577391249687
2 11:0.475427438288
2 12:0.536025635187
2 13:0.557876812233
2 14:0.624825921851
3 4:0.0
3 5:0.667880601751
3 6:0.735223698284
3 7:0.693005383887
3 8:0.586993793842
3 9:0.563831992822
3 10:0.761423662885
3 11:0.704782429786
3 12:0.871491765502
3 13:0.876990857754
3 14:0.976176484355
4 5:0.667880601751
4 6:0.735223698284
4 7:0.693005383887
4 8:0.586993793842
4 9:0.563831992822
4 10:0.761423662885
4 11:0.704782429786
4 12:0.871491765502
4 13:0.876990857754
4 14:0.976176484355
5 6:0.278299868552
5 7:0.32137167747
5 8:0.231064506142
5 9:0.387646907098
5 10:0.293826923006
5 11:0.369109485168
5 12:0.448233295292
5 13:0.493048774419
5 14:0.560477245844
6 7:0.394203718948
6 8:0.394572938578
6 9:0.301382410832
6 10:0.147565142734
6 11:0.331951637094
6 12:0.300129512172
6 13:0.498214889225
6 14:0.449519397705
7 8:0.322310539251
7 9:0.401439040559
7 10:0.348091126956
7 11:0.388917669322
7 12:0.384008568164
7 13:0.325805722258
7 14:0.397186330167
8 9:0.43601466349
8 10:0.381997488694
8 11:0.294081798458
8 12:0.483849542438
8 13:0.40502582641
8 14:0.562138902002
9 10:0.272464997924
9 11:0.472072621632
9 12:0.455956098637
9 13:0.589096851331
9 14:0.54668522032
10 11:0.354954975604
10 12:0.280529305022
10 13:0.439431104224
10 14:0.374294847837
11 12:0.297874531647
11 13:0.336726259285
11 14:0.441222910008
12 13:0.352949869341
12 14:0.249398969952
13 14:0.279963363958
</hsp>