sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2CT8-C55-C17
X
>2ZXU-D54-D17
X
>2ZM5-D54-D17
X
>3L0U-A54-A17
X
>1QTQ-B52-B15
X
>2RE8-B52-B15
X
>1O0C-B52-B15
X
>1O0B-B52-B15
X
>1EUY-B51-B15
X
</seq>
<hsp>
0 1:0.744729767867
0 2:0.718580884273
0 3:0.905801435916
0 4:0.94727450889
0 5:0.532129772934
0 6:0.817947698921
0 7:1.0
0 8:0.893546431865
1 2:0.0675879328732
1 3:0.386114534532
1 4:0.510383796976
1 5:0.434025037505
1 6:0.472713382201
1 7:0.52931533647
1 8:0.41776756737
2 3:0.361373287285
2 4:0.480326539081
2 5:0.400294947425
2 6:0.443611859869
2 7:0.50682416834
2 8:0.38796810043
3 4:0.271874275883
3 5:0.512648129849
3 6:0.277646346777
3 7:0.332821186212
3 8:0.205238917576
4 5:0.491740389552
4 6:0.193605224903
4 7:0.179435065189
4 8:0.153607463291
5 6:0.365496432111
5 7:0.53781260273
5 8:0.4534103529
6 7:0.24691173033
6 8:0.174726585039
7 8:0.154334782442
</hsp>