sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A2586-A2631
X
>3OHJ-A2511-A2556
X
>3OHZ-A2511-A2556
X
>3OH5-A2511-A2556
X
>3OXB-B37-B62
X
>3OHK-A2511-A2556
X
>3OI1-A2511-A2556
X
>3OH7-A2511-A2556
X
>2J01-A2558-A2603
X
</seq>
<hsp>
0 1:0.702181494499
0 2:0.642000058195
0 3:0.694075994698
0 4:0.816181928083
0 5:0.698218301327
0 6:0.646414757616
0 7:0.653202925647
0 8:0.604298178866
1 2:0.323214558453
1 3:0.236139076878
1 4:0.999998359557
1 5:0.119435341568
1 6:0.350736160153
1 7:0.286327149135
1 8:0.827874875167
2 3:0.234076889534
2 4:0.757325540199
2 5:0.342614812906
2 6:0.119451159003
2 7:0.237878734944
2 8:0.657454844828
3 4:0.936291348214
3 5:0.248833888913
3 6:0.251944599411
3 7:0.111859499285
3 8:0.800369619211
4 5:0.971093409762
4 6:0.711773243021
4 7:0.87155521344
4 8:0.749860210182
5 6:0.331191282456
5 7:0.257535143256
5 8:0.86072254303
6 7:0.207367503019
6 8:0.695648381982
7 8:0.784365276972
</hsp>