sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1QRU-B7-B20
X
>1QRS-B7-B20
X
>3F1F-A2072-A2222
X
>3CCR-02065-02117
X
>1QRT-B7-B20
X
>1QTQ-B7-B20
X
>1GTS-B7-B20
X
</seq>
<hsp>
0 1:0.396242838184
0 2:0.793523409354
0 3:0.89425663866
0 4:0.43314798841
0 5:0.59639795595
0 6:0.61415095426
1 2:0.855511391352
1 3:1.0
1 4:0.307062931985
1 5:0.511057295662
1 6:0.352177551743
2 3:0.735723968051
2 4:0.817387022735
2 5:0.610059700887
2 6:0.694054873268
3 4:0.969500452884
3 5:0.649885450945
3 6:0.906455162959
4 5:0.497324928839
4 6:0.355817889623
5 6:0.398056023574
</hsp>