sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8N-A1069-A1083
X
>1NJI-A2707-A2728
X
>2QA4-02706-02727
X
>1N8R-A2707-A2728
X
>2VQE-A1048-A1062
X
>2VQF-A1048-A1062
X
>2J02-A1048-A1062
X
>2J00-A1048-A1062
X
>2UUA-A1048-A1062
X
>1XMQ-A1043-A1057
X
>1VQ7-02707-02728
X
>2UXC-A1048-A1062
X
>1FJG-A1048-A1062
X
</seq>
<hsp>
0 1:0.777848395664
0 2:0.914569778949
0 3:0.738477085014
0 4:0.588659449644
0 5:0.514710021639
0 6:0.472051356141
0 7:0.480755386189
0 8:0.690072158997
0 9:0.6847096401
0 10:0.831543522955
0 11:0.588552061347
0 12:0.719325704098
1 2:0.53551580814
1 3:0.140827421982
1 4:0.30800504024
1 5:0.407426484634
1 6:0.727086316158
1 7:0.728048776897
1 8:0.366135937032
1 9:0.473364292367
1 10:0.345063433044
1 11:0.392575664818
1 12:0.458036299412
2 3:0.454095204273
2 4:0.523013007273
2 5:0.713506274456
2 6:0.994401423829
2 7:0.999993713553
2 8:0.606034896097
2 9:0.677810844912
2 10:0.598103473602
2 11:0.548892079288
2 12:0.470621485934
3 4:0.30615216968
3 5:0.41211330003
3 6:0.716470667235
3 7:0.718187355819
3 8:0.343683118924
3 9:0.479645793831
3 10:0.296302045732
3 11:0.357005432123
3 12:0.427208037721
4 5:0.228661109837
4 6:0.617230350767
4 7:0.619046668321
4 8:0.257851501263
4 9:0.302080453754
4 10:0.464123024006
4 11:0.245187375946
4 12:0.420001004986
5 6:0.460321121166
5 7:0.457730248637
5 8:0.235909893419
5 9:0.262659608453
5 10:0.473352188981
5 11:0.258575189057
5 12:0.51398787292
6 7:0.0243463801357
6 8:0.591758263084
6 9:0.533019109458
6 10:0.649265383663
6 11:0.497890186489
6 12:0.660209471066
7 8:0.587332536872
7 9:0.529765634197
7 10:0.647545416614
7 11:0.499957453538
7 12:0.668640767432
8 9:0.220569765487
8 10:0.334230300449
8 11:0.240741887655
8 12:0.499378373354
9 10:0.453367201984
9 11:0.214525423126
9 12:0.453482993541
10 11:0.37032311354
10 12:0.47924417707
11 12:0.294858071681
</hsp>