sequences=10
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OI1-A2270-A2268
X
>3OH7-A2270-A2268
X
>2OJ3-B56-B55
X
>1VC7-B57-B56
X
>3OHZ-A2270-A2268
X
>3OHK-A2270-A2268
X
>3U5H-52562-52560
X
>3R8T-A434-A433
X
>3CCJ-02316-02314
X
>1VBX-B56-B55
X
</seq>
<hsp>
0 1:0.295500298181
0 2:0.707408403642
0 3:0.700160523387
0 4:0.103306520063
0 5:0.246948127116
0 6:0.268127420489
0 7:0.472244266504
0 8:0.380582026832
0 9:0.570357938197
1 2:0.699642626475
1 3:0.614247000752
1 4:0.277321822297
1 5:0.296089872908
1 6:0.461894729466
1 7:0.425976312159
1 8:0.34014785215
1 9:0.530099625675
2 3:0.747367682688
2 4:0.678801376222
2 5:0.778365905612
2 6:0.561448641415
2 7:0.99999850013
2 8:0.466714694865
2 9:0.880224916353
3 4:0.676518318632
3 5:0.705587650366
3 6:0.760587979663
3 7:0.708765263444
3 8:0.674352604076
3 9:0.369468216692
4 5:0.216295719024
4 6:0.242361009111
4 7:0.464562121298
4 8:0.323683081953
4 9:0.540774357059
5 6:0.382131300877
5 7:0.354726928472
5 8:0.40191571932
5 9:0.505700637067
6 7:0.669030407365
6 8:0.326199889247
6 9:0.673116892702
7 8:0.60766647907
7 9:0.43062057386
8 9:0.621195856317
</hsp>