sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OGE-A727-A726
X
>2GDI-X14-X13
X
>3OGY-A727-A726
X
>2VQE-A1274-A1273
X
>2UUA-A727-A726
X
>1XMQ-A727-A726
X
>1FJG-A727-A726
X
</seq>
<hsp>
0 1:0.868391136931
0 2:0.0166147936873
0 3:0.441431803096
0 4:0.257037052246
0 5:0.410337587227
0 6:0.5319438232
1 2:0.87262231588
1 3:0.753749000097
1 4:1.0
1 5:0.638019431872
1 6:0.726025242239
2 3:0.441099552015
2 4:0.245262135538
2 5:0.405543558551
2 6:0.529174932537
3 4:0.451531494133
3 5:0.457816087513
3 6:0.67443741736
4 5:0.494665026582
4 6:0.663679094517
5 6:0.264863556502
</hsp>