sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNI-A1814-A1762
X
>3OI1-A1815-A1763
X
>2J03-A1815-A1763
X
>2J01-A1815-A1763
X
>3OH5-A1815-A1763
X
>3OH7-A1815-A1763
X
>3F1H-A1893-A1841
X
>3F1F-A1893-A1841
X
</seq>
<hsp>
0 1:0.643603172901
0 2:0.914514155247
0 3:0.916650422577
0 4:0.806697849192
0 5:0.808674926692
0 6:0.986522677515
0 7:0.999998400243
1 2:0.669495870681
1 3:0.680128226114
1 4:0.427380241717
1 5:0.425416138641
1 6:0.804385176394
1 7:0.815079042567
2 3:0.0481182700946
2 4:0.484926057469
2 5:0.548408794831
2 6:0.890509269306
2 7:0.905213332591
3 4:0.489080371884
3 5:0.553675980945
3 6:0.896454528328
3 7:0.912228398326
4 5:0.0794057644305
4 6:0.690996640049
4 7:0.692717422044
5 6:0.660839819141
5 7:0.660224475684
6 7:0.0544236630024
</hsp>