sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J03-A893-A894
X
>2J01-A893-A894
X
>3OI1-A893-A894
X
>3OHZ-A893-A894
X
>3OHK-A893-A894
X
>3OHJ-A893-A894
X
>3OH7-A893-A894
X
>3OH5-A893-A894
X
</seq>
<hsp>
0 1:0.0405054686254
0 2:0.661729373286
0 3:0.68022802215
0 4:0.736282117257
0 5:0.754264197377
0 6:0.996916790399
0 7:1.0
1 2:0.649786730189
1 3:0.665832201409
1 4:0.734622639103
1 5:0.75106953632
1 6:0.982143613576
1 7:0.985009955687
2 3:0.0511616170736
2 4:0.395562938036
2 5:0.393295421644
2 6:0.769158560962
2 7:0.768669105417
3 4:0.410936649736
3 5:0.405130806607
3 6:0.754292214347
3 7:0.753305478497
4 5:0.0373285458703
4 6:0.562212978803
4 7:0.564446249355
5 6:0.540203919675
5 7:0.542197421468
6 7:0.014257208817
</hsp>