sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5H-5677-5693
X
>3U5D-1671-1687
X
>3OGY-A1276-A1311
X
>3OGE-A1276-A1311
X
>3OI0-A1276-A1311
X
>3OHY-A1276-A1311
X
</seq>
<hsp>
0 1:0.211736507022
0 2:0.882095513531
0 3:0.88564160764
0 4:0.994019327802
0 5:0.999997064277
1 2:0.766301474754
1 3:0.769389993765
1 4:0.850208982526
1 5:0.857468100461
2 3:0.0104598477918
2 4:0.2959660284
2 5:0.292562917807
3 4:0.289815163933
3 5:0.286279172095
4 5:0.0121937869865
</hsp>