sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1VQ8-02587-02586
X
>2ZJR-X938-X1047
X
>1VQK-02587-02586
X
>1VQ9-02587-02586
X
>3CMA-02587-02586
X
>3CME-02587-02586
X
</seq>
<hsp>
0 1:1.0
0 2:0.435458306233
0 3:0.569634941324
0 4:0.782259250602
0 5:0.719991658331
1 2:0.909836169167
1 3:0.799684453955
1 4:0.959721958592
1 5:0.79685834277
2 3:0.304560520398
2 4:0.391902803252
2 5:0.34961417645
3 4:0.345844941179
3 5:0.27152096024
4 5:0.223294026114
</hsp>