ClaRNA

Doublet Group info: classifier/stacking/<>/GA/sub-002

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: <>/GA/sub-002
Members:
count: 32
download members
3CCR:02169:02167
3R8O:A872:A870
3OHC:A846:A844
3F1F:A1322:A1320
3OI0:A846:A844
1FFK:02122:02120
1VQM:02169:02167
3CCQ:02169:02167
2UXC:A846:A844
3OGE:A846:A844
3CD6:02169:02167
1YHQ:02169:02167
2OTL:02169:02167
3CME:02169:02167
3KNI:A1258:A1256
2J03:A1252:A1250
2QA4:02168:02166
1VQ9:02169:02167
3CMA:02169:02167
3OH7:A1252:A1250
3CC2:02169:02167
3OH5:A1252:A1250
1FJG:A846:A844
2VQE:A846:A844
1YIT:02169:02167
3G6E:02169:02167
1S72:02169:02167
3OHZ:A1252:A1250
1VQ7:02169:02167
1KD1:A2169:A2167
1XMQ:A846:A844
3U5D:11263:11261
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/<> 5 0.048
stacking/<< 2 0.117
base-phosphate/S_1BPh 10 0.177
base-phosphate/SW_2BPh 1 0.200
stacking/>> 6 0.206
base-phosphate/W_5BPh 2 0.207
base-ribose/H_0BR 5 0.222
base-ribose/SW_2BR 1 0.403
stacking/>< 2 0.479
base-phosphate/H_0BPh 2 0.531

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol