ClaRNA

Doublet Group info: classifier/stacking/<>/GA/sub-005

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: <>/GA/sub-005
Members:
count: 23
download members
2QEX:0135:035
1K9M:A135:A35
3CC4:0135:035
3OHZ:A158:A42
1Q86:A135:A35
2J03:A158:A42
1NJI:A135:A35
3CMA:0135:035
3CCQ:0135:035
1VQ8:0135:035
1QVG:0135:035
3I56:0135:035
3CXC:0135:035
1Q81:A135:A35
3CCE:0135:035
1VQO:0135:035
1N8R:A135:A35
1VQL:0135:035
1YIJ:0135:035
3CD6:0135:035
1VQ6:0135:035
1VQ7:0135:035
1VQ4:0135:035
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/<> 25 0.056
base-phosphate/S_1BPh 10 0.200
stacking/>> 6 0.228
stacking/<< 5 0.261
base-phosphate/H_7BPh 3 0.279
base-ribose/W_3BR 1 0.307
base-ribose/W_5BR 1 0.345
base-ribose/W_6BR 14 0.350
base-ribose/H_0BR 1 0.395
base-phosphate/SW_2BPh 6 0.406

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol