sequences=20
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2DU4-C8-C45
X
>3KNI-A2407-A1975
X
>3CME-02378-02047
X
>3F1H-A2486-A2054
X
>3CMA-02378-02047
X
>2J01-A2379-A1976
X
>1YJ9-02378-02047
X
>3OI1-A2332-A1976
X
>1KD1-A2378-A2047
X
>3OHZ-A2332-A1976
X
>3CC2-02378-02047
X
>1YJN-02378-02047
X
>1VQ6-02378-02047
X
>3CCU-02378-02047
X
>2QA4-02377-02046
X
>1VQ7-02378-02047
X
>1M90-A2378-A2047
X
>1N8R-A2378-A2047
X
>1Q82-A2378-A2047
X
>3R8S-A2495-A2053
X
</seq>
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