sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1YIT-01149-01120
X
>1YJW-01149-01120
X
>3CC7-01149-01120
X
>2OTL-01149-01120
X
>1VQM-01149-01120
X
>1VQP-01149-01120
X
>1VQL-01149-01120
X
>1YI2-01149-01120
X
>1QVG-01149-01120
X
>1N8R-A1149-A1120
X
>1NJI-A1149-A1120
X
</seq>
<hsp>
0 1:0.22009888385
0 2:0.488101555846
0 3:0.572422116389
0 4:0.999996202768
0 5:0.99578977861
0 6:0.960954518884
0 7:0.365453348682
0 8:0.880123482048
0 9:0.89767273447
0 10:0.855230785688
1 2:0.471152882998
1 3:0.511505941197
1 4:0.883821389495
1 5:0.872619932865
1 6:0.842935189178
1 7:0.311352862258
1 8:0.730382888713
1 9:0.756656646518
1 10:0.720209484843
2 3:0.213619065657
2 4:0.637809927009
2 5:0.654753102071
2 6:0.632957615525
2 7:0.293448698054
2 8:0.668402142297
2 9:0.690607021399
2 10:0.648698252158
3 4:0.590730190605
3 5:0.611691550474
3 6:0.608227935268
3 7:0.301523225569
3 8:0.544802341115
3 9:0.582520300554
3 10:0.549073085438
4 5:0.116927776539
4 6:0.128502711262
4 7:0.686039894155
4 8:0.542431030174
4 9:0.462974235621
4 10:0.472842663135
5 6:0.0747889637223
5 7:0.694218991436
5 8:0.588390628236
5 9:0.500941522787
5 10:0.508682019259
6 7:0.669382559694
6 8:0.597611829179
6 9:0.504305652624
6 10:0.510134915404
7 8:0.563945658109
7 9:0.566201043822
7 10:0.517943457168
8 9:0.186345668297
8 10:0.188219356925
9 10:0.0803960687409
</hsp>